HiFive
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  • Introduction
  • Getting started
  • Restriction Fragment Handling
  • Loading Data
  • Filtering Data
  • Distance-Dependence Estimation
  • Normalizing Data
  • Binning Strategies
  • Multi-Resolution Heatmap
  • QuASAR Hi-C Scoring
  • Using HiFive
  • Tutorial for 5C Classes
  • Tutorial for HiC Classes
  • HiFive’s API
    • The Fragment class
    • The Fend class
    • The FiveCData class
    • The HiCData class
    • The FiveC class
    • The HiC class
    • The fivec_binning module
    • The hic_binning module
    • The quasar module
    • The plotting module
  • Release History
HiFive
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  • HiFive’s API
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HiFive’s API¶

Contents:

  • The Fragment class
  • The Fend class
  • The FiveCData class
  • The HiCData class
  • The FiveC class
  • The HiC class
  • The fivec_binning module
  • The hic_binning module
  • The quasar module
  • The plotting module
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© Copyright 2015, Michael Sauria Revision 317d2dc9.

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